BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F07LP1|AL426072
(376 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig285 464 e-131
>3x_Contig285
Length = 777
Score = 464 bits (233), Expect = e-131
Identities = 235/237 (99%)
Strand = Plus / Minus
Query: 140 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 715
Query: 200 tccgcttaaaacttgattacctggtgcggctaactctaatctaatgattaaagacatggc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tccgcttaaaacttgattacctggtgcggctaactctaatctaatgattaaagacatggc 655
Query: 260 agtacctgccataccacagaaaatagcaaagataaagtataavacagcaatatctttagc 319
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 654 agtacctgccataccacagaaaatagcaaagataaagtataaaacagcaatatctttagc 595
Query: 320 atttgtagaatataatcatctttcgatcattaatttatttttataattattatrtta 376
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 594 atttgtagaatataatcatctttcgatcattaatttatttttataattattatatta 538
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3423
Number of Sequences: 1807
Number of extensions: 3423
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 376
length of database: 10,358,551
effective HSP length: 16
effective length of query: 360
effective length of database: 10,329,639
effective search space: 3718670040
effective search space used: 3718670040
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)